James Andrew Alspaugh, MD

Professor of Medicine
Professor in Molecular Genetics and Microbiology
Campus mail DUMC Box 102359, 303 Sands Building, Research Drive, Durham, NC 27710
Phone (919) 684-0045
Email address andrew.alspaugh@duke.edu

The focus of my research is to understand the ways in which microorganisms sense and respond to changes in their environment. As microbial pathogens enter the infected host, dramatic genetic and phenotypic events occur that allow these organisms to survive in this harsh environment. We study the model fungal organism Cryptococcus neoformans to define signal transduction pathways associated with systemic fungal diseases. This pathogenic fungus causes lethal infections of the central nervous system in patients with AIDS and other immunological disorders. In addition to being an important pathogen, C. neoformans displays well-characterized and inducible virulence determinants. It is an outstanding system for dissecting the signaling pathways associated with pathogenicity.

The main techniques used in the lab are those of molecular genetics. We are able to readily mutate C. neoformans genes by homologous recombination. Mutant strains with disruptions in targeted genes are then evaluated in vitro for various phenotypes including altered expression of polysaccharide capsule and melanin. The effects of gene disruption on pathogenicity are also evaluated in animal models of cryptococcal disease. Using these techniques, we have identified a novel G-alpha protein/cAMP-dependent signaling pathway associated with mating and pathogenicity.

This research is complemented by the other investigators in the Duke University Mycology Research Unit. The members of this research community are pursuing studies in fungal pathogenesis, identifying novel antifungal drug targets, and studying the ecology of several medically important fungi.

Keywords: Microbial Pathogenesis
Cryptococcus neoformans
Signal transduction
Fungal mating
G proteins

Education and Training

  • Fellow, Infectious Diseases, Duke University School of Medicine, 1995 - 1998
  • Resident, Medicine, Vanderbilt University, School of Medicine, 1992 - 1995
  • Intern, Medicine, Vanderbilt University, School of Medicine, 1991 - 1992
  • M.D., Duke University, 1991


Esher, S. K., J. A. Granek, and J. A. Alspaugh. “AIM-HII: a new method to rapidly identify agrobacterium-mediated insertion sites in C. neoformans.” Mycoses 57 (May 1, 2014): 79–80.


Nichols, C. B., K. M. Selvig, S. K. Esher, and J. A. Alspaugh. “Rim pathway-mediated adaptation to the host environment.” Mycoses 57 (May 1, 2014): 12–13.


Peconick, L. D. F., H. C. Paes, C. B. Nichols, J. A. Alspaugh, M. S. Felipe, and L. F. Fernandes. “The Cryptococcus neoformans Velvet gene VOSA is a positive regulator of mating.” Mycoses 57 (May 1, 2014): 75–76.


Paes, H. C., L. S. Derengowski, P. Albuquerque, A. M. Nicola, M. A. Vallim, J. A. Alspaugh, M. S. Felipe, and L. F. Fernandes. “Role of a Ryp1 homologue in the virulence of Cryptococcus neoformans.” Mycoses 57 (May 1, 2014): 74–74.


Nichols, C. B., C. Vazquez, and J. A. Alspaugh. “Drug delivery in C. neoformans using nanoparticles.” Mycoses 57 (May 1, 2014): 50–50.


Oliveira, F. F. M., H. C. P. Costa Paes, L. D. F. Peconick, P. Albuquerque, A. M. Nicola, M. H. Melo, F. L. Fonseca, et al. “Erg6 is a potential drug target in Cryptococcus neoformans.” Mycoses 57 (May 1, 2014): 46–47.


Selvig, K. M., and J. A. Alspaugh. “The basics of the Cryptococcus neoformans alkaline response pathway: adapting to a bitter host.” Mycoses 57 (May 1, 2014): 18–18.


O’Meara, Teresa R., Wenjie Xu, Kyla M. Selvig, Matthew J. O’Meara, Aaron P. Mitchell, and J Andrew Alspaugh. “The Cryptococcus neoformans Rim101 transcription factor directly regulates genes required for adaptation to the host.” Mol Cell Biol 34, no. 4 (February 2014): 673–84. https://doi.org/10.1128/MCB.01359-13.

Full Text

Selvig, Kyla, Elizabeth R. Ballou, Connie B. Nichols, and J Andrew Alspaugh. “Restricted substrate specificity for the geranylgeranyltransferase-I enzyme in Cryptococcus neoformans: implications for virulence.” Eukaryot Cell 12, no. 11 (November 2013): 1462–71. https://doi.org/10.1128/EC.00193-13.

Full Text